STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64341.1Hypothetical protein. (727 aa)    
Predicted Functional Partners:
AKB64769.1
Glycogen phosphorylase.
  
 0.812
AKB64962.1
Mannose-6-phosphate isomerase, bifunctional enzyme.
 
 0.737
AKB65662.1
Glucoamylase.
 
  
 0.580
AKB63637.1
Glucoamylase.
 
  
 0.562
AKB63857.1
Glycosyltransferase.
 
 0.542
AKB65774.1
Glycosyltransferase.
 
 0.542
AKB63856.1
Glycosyl transferase, group 1.
 
 0.523
AKB63918.1
Hypothetical protein.
 
 0.511
AKB65185.1
UPF0135 protein Bsu YqfO.
 
 
   0.508
AKB64342.1
Malto-oligosyltrehalose trehalohydrolase.
 
  
 0.504
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.