STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB64342.1Malto-oligosyltrehalose trehalohydrolase. (668 aa)    
Predicted Functional Partners:
AKB64769.1
Glycogen phosphorylase.
 
 
 0.903
AKB64383.1
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.799
AKB63973.1
Amino acid permease.
  
 0.770
AKB64700.1
Amino acid transporter.
  
 0.770
AKB64941.1
Dimethylamine permease.
  
 0.770
AKB65068.1
Amino acid permease.
  
 0.770
AKB65069.1
Amino acid permease.
  
 0.770
AKB66424.1
Monomethylamine permease.
  
 0.770
AKB66230.1
Beta-phosphoglucomutase.
 
 
 0.747
AKB63814.1
Beta-phosphoglucomutase.
 
 
 0.739
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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