STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64368.1Putative type II restriction enzyme methylase subunit. (1172 aa)    
Predicted Functional Partners:
AKB64358.1
Putative ATP-dependent protease.
 
  
 0.968
AKB66063.1
Hypothetical protein.
  
  
 0.952
AKB64366.1
ATP-dependent DNA helicase.
  
    0.801
AKB64367.1
ATP-dependent DNA helicase.
  
    0.801
AKB64365.1
ATP-dependent DNA helicase.
 
    0.795
AKB64370.1
ATPase-like protein.
 
     0.795
AKB64371.1
Putative cytoplasmic protein.
 
     0.792
AKB64359.1
Putative cytoplasmic protein.
 
     0.789
AKB64364.1
ATP-dependent DNA helicase.
 
    0.645
AKB64876.1
UvsW helicase.
  
  
 0.580
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.