STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64394.1Sulfopyruvate decarboxylase - beta subunit. (429 aa)    
Predicted Functional Partners:
AKB64395.1
Cysteate synthase; Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate.
 
     0.927
AKB64254.1
Aspartate aminotransferase.
    
 0.799
AKB65527.1
Biosynthetic Aromatic amino acid aminotransferase alpha / Aspartate aminotransferase.
    
 0.786
AKB66079.1
Valine--pyruvate aminotransferase.
    
 0.783
AKB63274.1
Mrr restriction system protein.
   
    0.761
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
     
 0.757
AKB64251.1
Serine--glyoxylate aminotransferase.
    
 0.754
ribL
FMN adenylyltransferase, type 3 archaeal; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
    
 0.747
hemL
Glutamate-1-semialdehyde aminotransferase.
    
  0.726
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
    
 0.724
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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