STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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alaOrnithine cyclodeaminase; Catalyzes the NAD(+)-dependent oxidative deamination of L- alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate; Belongs to the ornithine cyclodeaminase/mu-crystallin family. Archaeal alanine dehydrogenase subfamily. (326 aa)    
Predicted Functional Partners:
AKB66049.1
Pyruvate carboxyl transferase subunit A.
    
  0.839
AKB64079.1
2-oxoglutarate oxidoreductase, alpha subunit.
    
 0.811
AKB66519.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
    
 0.811
AKB63798.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.809
AKB65270.1
NAD-dependent malic enzyme.
    
 0.807
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
    
  0.802
AKB66518.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
    
  0.802
AKB66520.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
    
  0.802
AKB66050.1
Pyruvate carboxyl transferase subunit B.
    
  0.801
AKB66517.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
    
  0.801
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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