STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64438.1Integral membrane protein. (291 aa)    
Predicted Functional Partners:
AKB65937.1
Glutamate transport membrane-spanning protein.
 
  
 0.631
AKB66250.1
Aldo/keto reductase.
  
    0.605
AKB63569.1
Kef-type transport system 2 (probable substrate potassium), subunit 2.
  
  
 0.592
AKB63573.1
Kef-type transport system 2 (probable substrate potassium), subunit 1.
  
  
 0.592
AKB65971.1
Glutathione-regulated potassium-efflux system protein KefC.
  
  
 0.592
AKB65091.1
Integral membrane protein.
  
     0.590
AKB64680.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps.
 
  
 0.580
AKB65153.1
Alcohol dehydrogenase.
  
  
 0.538
AKB63503.1
Cytochrome C-type biogenesis protein (ccdA), conjectural.
  
    0.535
AKB65314.1
Integral membrane protein.
  
     0.535
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.