STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64464.1Formylmethanofuran dehydrogenase subunit D. (132 aa)    
Predicted Functional Partners:
AKB64465.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.998
AKB64466.1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit G.
 
 0.996
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
  
 0.995
AKB65897.1
Formylmethanofuran dehydrogenase subunit A.
 
 0.959
AKB65896.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.957
AKB66298.1
Formylmethanofuran dehydrogenase subunit A.
 
 0.956
AKB64469.1
Polyferredoxin protein MvhB.
 
 0.952
AKB66295.1
Formylmethanofuran dehydrogenase (molybdenum) subunit B.
 
 
 0.950
AKB66299.1
Polyferredoxin protein MvhB.
 
 0.906
AKB63766.1
Threonine dehydrogenase and related Zn-dependent dehydrogenase.
     
  0.900
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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