STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64467.1Rubredoxin. (93 aa)    
Predicted Functional Partners:
AKB64611.1
Glutaredoxin family protein.
 
  
 0.791
AKB64464.1
Formylmethanofuran dehydrogenase subunit D.
       0.670
AKB64465.1
Formylmethanofuran dehydrogenase subunit B.
       0.670
AKB63532.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
     
 0.521
AKB63533.1
Glutamine amidotransferase, class-II.
     
 0.514
AKB64845.1
Hypothetical protein.
 
  
 0.463
AKB63845.1
Glutamate synthase [NADPH] small chain.
    
  0.460
AKB64698.1
Glutamine synthetase type I.
  
  
 0.459
AKB63535.1
Glutamine synthetase type I.
  
  
 0.444
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.