STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64479.1Putative ankyrin repeat protein. (360 aa)    
Predicted Functional Partners:
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
   
 
 0.999
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
   
 
 0.999
AKB64721.1
Hypothetical protein.
 
 0.922
AKB64754.1
Hypothetical protein.
 
 0.922
AKB65428.1
WD-domain containing protein.
 
 0.914
AKB64424.1
Serine/threonine protein phosphatase BSU1.
 
 
 0.908
AKB65876.1
PQQ enzyme repeat domain protein.
 
 0.905
AKB64480.1
GTP cyclohydrolase III (methanopterin).
 
 0.883
AKB63764.1
Hypothetical protein.
   
 0.881
AKB66208.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
   
 0.881
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.