Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB64482.1Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC. (306 aa)    
Predicted Functional Partners:
AKB64483.1
Glycine betaine ABC transport system, permease protein OpuAB.
 
 0.999
AKB64484.1
Glycine betaine ABC transport system, ATP-binding protein OpuAA.
 
 0.999
AKB64037.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
    
  0.545
AKB63457.1
ATPase component BioM of energizing module of biotin ECF transporter.
    
  0.544
AKB63458.1
ATPase component BioM of energizing module of biotin ECF transporter.
    
  0.544
AKB63615.1
ATPase component NikO of energizing module of nickel ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
    
  0.544
AKB64038.1
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
    
  0.544
AKB64861.1
ATPase component of general energizing module of ECF transporters.
    
  0.544
AKB65507.1
Duplicated ATPase component of energizing module of predicted tryptophan ECF transporter.
    
  0.544
AKB65880.1
ATPase component of general energizing module of ECF transporters.
    
  0.544
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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