STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64522.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
AKB64524.1
DUF324 domain containing Cmr2-like protein.
       0.705
AKB64526.1
CRISPR-associated RAMP Cmr4.
       0.683
AKB64523.1
CRISPR-associated RAMP Cmr1.
       0.654
AKB64525.1
CRISPR-associated protein Csx11.
       0.653
AKB64033.1
S-layer family duplication domain protein.
  
     0.517
AKB64521.1
Hypothetical protein.
       0.510
AKB65144.1
Putative phosphoglycerate mutase.
  
     0.507
AKB66035.1
CoB--CoM heterodisulfide reductase 2 subunit E.
  
     0.414
AKB65210.1
Phytoene dehydrogenase.
  
     0.409
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.