STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64536.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
AKB65428.1
WD-domain containing protein.
 
 0.817
AKB64479.1
Putative ankyrin repeat protein.
 
 0.816
AKB65475.1
Chaperone protein.
 
 0.805
AKB65876.1
PQQ enzyme repeat domain protein.
 
 0.747
dnaK
Chaperone protein DnaK; Acts as a chaperone.
 
 0.743
AKB66478.1
Chaperone protein.
 
 0.742
AKB65770.1
Glycosyltransferase.
  
 0.727
AKB66211.1
Glycosyl transferase family 2.
  
 0.727
AKB66212.1
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase family protein.
  
 0.727
AKB65722.1
DNA-directed RNA polymerase subunit D.
  
 0.723
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.