STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64545.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
AKB63214.1
Hypothetical protein.
 
 0.939
AKB64136.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
  
 
 0.857
AKB64138.1
Sulfite reductase, assimilatory-type.
  
 
 0.857
AKB66036.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
  
 
 0.857
AKB64845.1
Hypothetical protein.
 
  
 0.791
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
    
 0.745
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
    
 0.745
AKB63532.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
  
 
 0.697
AKB63533.1
Glutamine amidotransferase, class-II.
    
 0.681
AKB64189.1
Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.681
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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