Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB64552.1Iron-sulfur cluster binding protein. (172 aa)    
Predicted Functional Partners:
AKB64553.1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
 
 0.991
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
  
 
 0.973
AKB65255.1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
 
 0.911
AKB65585.1
Methanophenazine hydrogenase cytochrome b subunit.
  
 0.875
AKB65708.1
Methanophenazine hydrogenase cytochrome b subunit.
  
 0.875
AKB65714.1
Methanophenazine hydrogenase cytochrome b subunit.
  
 0.875
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
  
 
 0.863
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
  
 
 0.863
AKB63402.1
Iron-sulfur-binding protein.
  
 
 0.830
AKB63274.1
Mrr restriction system protein.
  
    0.756
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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