STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64554.1Proton/glutamate symport protein / Sodium/glutamate symport protein. (517 aa)    
Predicted Functional Partners:
AKB65237.1
Sodium/glycine symporter GlyP.
 
  
 0.620
AKB64479.1
Putative ankyrin repeat protein.
 0.607
AKB66336.1
Citrate synthase (si).
  
  
 0.593
AKB66315.1
Sodium-solute symporter, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.545
AKB64700.1
Amino acid transporter.
 
 
 0.513
AKB65592.1
Sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.504
AKB65069.1
Amino acid permease.
 
 
 0.501
AKB66542.1
Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.501
AKB65068.1
Amino acid permease.
 
 
 0.480
AKB65936.1
Glutamate transport ATP-binding protein.
  
  
 0.469
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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