STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64618.1Sulfite reductase-related protein. (293 aa)    
Predicted Functional Partners:
AKB63618.1
PUA-PAPS reductase like fusion.
  
 
 0.933
AKB64580.1
PUA-PAPS reductase like fusion.
  
 
 0.933
AKB63214.1
Hypothetical protein.
   
 0.925
AKB65419.1
F420H2 dehydrogenase subunit FpoO.
     
  0.773
AKB63530.1
Coenzyme F420 hydrogenase subunit beta.
   
 0.740
AKB66034.1
CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D.
  
 
 0.717
AKB63878.1
Coenzyme F420 hydrogenase subunit beta.
   
 0.623
AKB64844.1
Coenzyme F420 hydrogenase subunit beta.
   
 0.622
AKB64619.1
Branched-chain amino acid transport protein.
       0.569
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
     
 0.481
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.