STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64676.1Transcriptional regulator, ArsR family. (137 aa)    
Predicted Functional Partners:
AKB65813.1
Iron(III) dicitrate-binding protein.
  
  
 0.761
AKB64741.1
Cob(I)alamin adenosyltransferase.
    
 0.747
AKB64675.1
Hypothetical protein.
     
 0.691
AKB65815.1
Iron(III) dicitrate transport ATP-binding protein.
 
  
 0.685
AKB65542.1
Thioredoxin reductase.
  
  
 0.680
AKB65814.1
Iron(III) dicitrate transport system permease protein.
 
  
 0.636
AKB64170.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
   
   0.621
AKB66535.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
   
   0.621
AKB65473.1
Superoxide dismutase (Mn/Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.592
AKB65646.1
Arsenical resistance operon repressor.
 
   
 0.592
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.