STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64683.1Surface layer protein B. (663 aa)    
Predicted Functional Partners:
AKB63448.1
GTP-binding protein RBG1/RBG2.
  
 
   0.678
AKB65093.1
Peptidyl-prolyl cis-trans isomerase.
   
 
 0.670
AKB65224.1
Serine protease inhibitor (serpin family); Belongs to the serpin family.
  
 0.668
AKB65495.1
Phospholipid-binding protein.
   
 
 0.652
AKB66336.1
Citrate synthase (si).
   
 
 0.651
rps11
SSU ribosomal protein S14e (S11p); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
   
 0.461
AKB65652.1
Putative thiol:disulfide oxidoreductase involved in cytochrome C-type biogenesis.
 
 
 0.400
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.