STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64702.1Ketoisovalerate oxidoreductase subunit VorA. (481 aa)    
Predicted Functional Partners:
AKB64703.1
Ketoisovalerate oxidoreductase subunit VorB.
 
 0.999
AKB64704.1
Ketoisovalerate oxidoreductase subunit VorC.
 
 
 0.994
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.972
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
 
0.923
AKB66520.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
 0.904
AKB64079.1
2-oxoglutarate oxidoreductase, alpha subunit.
 
0.865
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 
 0.859
AKB66519.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
  
 0.820
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
   
 
 0.662
AKB66518.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
  
 
 0.651
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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