STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64703.1Ketoisovalerate oxidoreductase subunit VorB. (351 aa)    
Predicted Functional Partners:
AKB64702.1
Ketoisovalerate oxidoreductase subunit VorA.
 
 0.999
AKB64704.1
Ketoisovalerate oxidoreductase subunit VorC.
 
 
 0.993
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
 
 0.989
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.954
AKB66520.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
 0.935
AKB65265.1
Indolepyruvate oxidoreductase subunit IorB.
 
 0.919
AKB65787.1
Indolepyruvate oxidoreductase subunit IorB.
 
 0.916
AKB66518.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
  
 0.898
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 
 0.853
AKB66517.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
 0.851
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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