Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB64704.1Ketoisovalerate oxidoreductase subunit VorC. (82 aa)    
Predicted Functional Partners:
AKB64702.1
Ketoisovalerate oxidoreductase subunit VorA.
 
 
 0.997
AKB64703.1
Ketoisovalerate oxidoreductase subunit VorB.
 
 
 0.997
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 0.946
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
  0.925
AKB64706.1
Transcriptional regulator, Hth-3 family.
 
  
 0.733
gatD
Glutamyl-tRNA(Gln) amidotransferase asparaginase subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
 
 
  0.542
AKB66299.1
Polyferredoxin protein MvhB.
 
 
 0.530
AKB65597.1
Hypothetical protein.
  
     0.523
AKB64865.1
Hypothetical protein.
  
     0.514
AKB63402.1
Iron-sulfur-binding protein.
  
 
 0.509
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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