STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64744.1ABC transporter, ATP-binding protein. (267 aa)    
Predicted Functional Partners:
AKB64743.1
Multidrug ABC transporter, permease protein.
 
 
 0.976
AKB63546.1
ABC transporter, permease protein.
 
 
 0.927
AKB65883.1
ABC transporter, permease protein.
 
 
 0.897
AKB65442.1
ABC transporter, permease protein.
 
 
 0.896
AKB64656.1
ABC transporter, permease protein.
 
 
 0.864
AKB65451.1
Hypothetical protein.
  
 0.734
AKB64149.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps.
  
  
 0.731
AKB64153.1
MATE family drug/sodium antiporter.
  
  
 0.731
AKB65332.1
ABC transporter, ATP-binding protein.
    
 0.669
AKB65601.1
Cell surface protein.
  
 
 0.579
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.