STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64761.1Transcriptional regulator, MarR family. (139 aa)    
Predicted Functional Partners:
lon
ATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
 
   
 0.648
AKB63675.1
Hypothetical protein.
 
  
 0.635
AKB64762.1
Hypothetical protein.
       0.560
AKB65235.1
ABC transporter, permease protein.
 
   
 0.557
AKB64642.1
Putative membrane protein.
 
     0.514
AKB64812.1
Putative membrane protein.
 
     0.506
AKB64639.1
Putative membrane protein.
 
     0.465
AKB64572.1
Ferredoxin.
 
 
 0.459
AKB63807.1
Multidrug resistance protein B.
 
   
 0.456
AKB63618.1
PUA-PAPS reductase like fusion.
 
  
 0.438
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.