STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64769.1Glycogen phosphorylase. (559 aa)    
Predicted Functional Partners:
AKB66342.1
Phosphomannomutase; Belongs to the phosphohexose mutase family.
 
 
 0.984
AKB63639.1
Alpha-amylase.
 
 
 0.974
AKB63640.1
Alpha-amylase.
 
 
 0.974
AKB63367.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.963
AKB64383.1
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.939
AKB64342.1
Malto-oligosyltrehalose trehalohydrolase.
 
 
 0.903
glmM
Phosphomannomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.866
AKB65152.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.856
AKB65859.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.855
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.848
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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