Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB64818.1Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase alpha subunit. (278 aa)    
Predicted Functional Partners:
AKB64817.1
Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase beta subunit.
 0.999
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.995
AKB65270.1
NAD-dependent malic enzyme.
 
 
 0.963
AKB63221.1
Fe-S oxidoreductase; Homology to heterodisulfide reductase 2 iron-sulfur subunit.
    
 0.957
AKB66336.1
Citrate synthase (si).
  
 
 0.939
AKB65555.1
Succinate-semialdehyde dehydrogenase [NADP+].
  
 
 0.891
argH
Argininosuccinate lyase.
    
 0.837
AKB64254.1
Aspartate aminotransferase.
    
 0.811
AKB65527.1
Biosynthetic Aromatic amino acid aminotransferase alpha / Aspartate aminotransferase.
    
 0.811
AKB65097.1
Metal-dependent hydrolase.
    
  0.804
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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