STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64821.1Calcium-dependent protease precursor; Belongs to the peptidase S8 family. (815 aa)    
Predicted Functional Partners:
AKB64285.1
Cell surface protein.
  
 
 0.761
AKB64715.1
Cell surface protein.
  
 
 0.761
AKB66539.1
Pheromone shutdown protein.
   
 
 0.693
AKB64822.1
Hypothetical protein.
      
0.682
AKB64479.1
Putative ankyrin repeat protein.
 
 0.620
rpl10e
LSU ribosomal protein L10e (L16p); Belongs to the universal ribosomal protein uL16 family.
  
 
 0.615
AKB64217.1
Membrane alanine aminopeptidase N.
  
 
 0.583
AKB65991.1
Na+/H+ antiporter.
 
   
 0.575
AKB64823.1
Hypothetical protein.
       0.572
AKB64820.1
Hypothetical protein.
       0.536
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.