STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64834.1Glycosyltransferase. (254 aa)    
Predicted Functional Partners:
AKB64835.1
Glycosyltransferase.
     0.950
AKB64833.1
Hypothetical protein.
       0.845
AKB64832.1
Sorbitol dehydrogenase.
 
     0.826
AKB64831.1
CapK protein, putative.
 
     0.675
AKB63327.1
Glycosyltransferase.
 
     0.543
AKB63334.1
Glycosyltransferase (family 2).
 
     0.542
AKB63322.1
Dolichol-phosphate mannosyltransferase.
 
     0.526
AKB66224.1
Glycosyl transferase, group 1.
 
     0.521
AKB63345.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
     0.492
AKB64830.1
Capsule biosynthesis protein capA.
 
     0.458
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.