STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64835.1Glycosyltransferase. (95 aa)    
Predicted Functional Partners:
AKB64834.1
Glycosyltransferase.
     0.950
AKB64833.1
Hypothetical protein.
       0.845
AKB64832.1
Sorbitol dehydrogenase.
 
     0.806
AKB64831.1
CapK protein, putative.
 
     0.603
AKB65182.1
Hypothetical protein.
  
     0.524
AKB65776.1
Hypothetical protein.
 
     0.523
AKB63526.1
Hypothetical protein.
  
     0.508
AKB63371.1
Hypothetical protein.
 
     0.455
AKB63344.1
Hypothetical protein.
 
     0.434
AKB65778.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.