STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64856.1ABC transporter, ATP-binding protein. (236 aa)    
Predicted Functional Partners:
AKB64782.1
Cell division protein FtsX.
 0.980
AKB63553.1
ABC transporter, permease protein.
 0.976
AKB64864.1
ABC transporter, permease protein.
 0.972
AKB66233.1
ABC transporter, permease protein.
 0.966
AKB63549.1
ABC transporter, permease protein.
 0.960
AKB65020.1
ABC transporter, permease protein.
 0.946
AKB66256.1
ABC transporter, permease protein.
 0.905
AKB64857.1
Cell surface glycoprotein.
       0.779
AKB64858.1
Cell surface protein.
       0.779
AKB65235.1
ABC transporter, permease protein.
  
 0.775
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.