STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64894.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
AKB63891.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.629
AKB65503.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.629
AKB66404.1
Hypothetical protein.
  
  
 0.574
AKB64895.1
PPOX class probable F420-dependent enzyme.
  
  
 0.558
AKB64849.1
Lactoylglutathione lyase and related lyase.
  
  
 0.507
AKB66463.1
Lactoylglutation lyase.
  
  
 0.507
cofD
2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
  
 
 0.455
AKB63554.1
Putative NADPH-flavin oxidoreductase.
  
 
 0.447
AKB64594.1
Hypothetical protein.
  
 
 0.447
AKB64995.1
Flavoredoxin Flr.
  
 
 0.447
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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