STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64895.1PPOX class probable F420-dependent enzyme. (162 aa)    
Predicted Functional Partners:
AKB63399.1
PAC2 family protein.
  
    0.683
AKB64894.1
Hypothetical protein.
  
  
 0.559
AKB63400.1
Hypothetical protein.
   
    0.543
AKB64132.1
Ferredoxin.
   
    0.513
AKB64159.1
Phosphomethylpyrimidine kinase; Thiamin-phosphate synthase ThiN.
 
  
  0.510
AKB66463.1
Lactoylglutation lyase.
 
   
 0.416
AKB64896.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
       0.406
AKB64186.1
Phosphotransferase enzyme family protein.
 
     0.403
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.