STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64942.1Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing. (467 aa)    
Predicted Functional Partners:
AKB64943.1
Dimethylamine methyltransferase corrinoid protein.
    
 0.953
AKB66421.1
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific.
    
 0.947
AKB65830.1
Dimethylamine methyltransferase corrinoid protein.
    
 0.909
AKB66181.1
Dimethylamine methyltransferase corrinoid protein.
    
 0.907
AKB65831.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
     
 
0.900
AKB66176.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
     
 
0.900
AKB63997.1
Methylcobamide:CoM methyltransferase MtaA.
     
 0.758
AKB65948.1
Methylcobamide:CoM methyltransferase MtaA.
     
 0.755
AKB63427.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
     
 0.750
AKB64321.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
     
 0.750
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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