STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64950.1Response regulator receiver. (154 aa)    
Predicted Functional Partners:
AKB64949.1
Hypothetical protein.
     0.928
AKB64330.1
Sensory transduction histidine kinase.
 
 0.880
AKB64345.1
Sensory transduction histidine kinase.
   
 0.783
AKB64887.1
Sensory transduction histidine kinase.
   
 0.763
AKB65024.1
Sensory transduction histidine kinase.
   
 0.763
AKB64781.1
Hypothetical protein.
 
 0.759
AKB65274.1
Sensory transduction histidine kinase.
 
 0.756
AKB64779.1
Hypothetical protein.
 
 0.753
AKB66095.1
Sensory transduction histidine kinase.
   
 0.748
AKB66099.1
Sensory transduction histidine kinase.
   
 0.747
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.