STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64952.1Response regulator receiver. (168 aa)    
Predicted Functional Partners:
AKB64330.1
Sensory transduction histidine kinase.
 
 0.876
AKB64949.1
Hypothetical protein.
     0.780
AKB64345.1
Sensory transduction histidine kinase.
   
 0.767
AKB65024.1
Sensory transduction histidine kinase.
   
 0.754
AKB64887.1
Sensory transduction histidine kinase.
   
 0.751
AKB64781.1
Hypothetical protein.
 
 0.749
AKB65274.1
Sensory transduction histidine kinase.
 
 0.740
AKB64779.1
Hypothetical protein.
 
 0.739
AKB65149.1
Sensory transduction histidine kinase.
 
 0.738
AKB66099.1
Sensory transduction histidine kinase.
   
 0.738
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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