Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB64953.1Hypothetical protein. (484 aa)    
Predicted Functional Partners:
AKB66482.1
Exopolyphosphatase.
 
 
 0.821
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP); Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.744
AKB66481.1
Hypothetical protein.
 
     0.471
AKB65375.1
Hypothetical protein.
   
    0.457
surE
5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.413
AKB63224.1
Fe-S OXIDOREDUCTASE.
  
    0.412
AKB65212.1
BchE/P-methylase family protein.
  
    0.412
AKB66341.1
(dimethylallyl)adenosine tRNA methylthiotransferase.
  
    0.412
AKB64650.1
Putative low-affinity inorganic phosphate transporter.
  
  
 0.400
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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