STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64986.1Inner membrane protein YihY, formerly thought to be RNase BN. (270 aa)    
Predicted Functional Partners:
AKB65281.1
Ribonuclease PH.
    
  0.627
AKB64342.1
Malto-oligosyltrehalose trehalohydrolase.
 
  
 0.570
AKB64985.1
Hypothetical protein.
       0.553
AKB64676.1
Transcriptional regulator, ArsR family.
     
 0.552
AKB65648.1
Arsenate reductase.
 
  
 0.494
AKB63932.1
Arsenate reductase.
 
  
 0.492
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
     
 0.465
AKB64202.1
Trk system potassium uptake protein TrkA.
 
   
 0.459
AKB63960.1
3'-to-5' exoribonuclease RNase R.
 
  
 0.449
AKB63637.1
Glucoamylase.
    
  0.445
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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