STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64995.1Flavoredoxin Flr. (188 aa)    
Predicted Functional Partners:
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
  
 
 0.538
AKB65098.1
5,10-methylenetetrahydromethanopterin reductase.
  
 
 0.538
AKB65687.1
5,10-methylenetetrahydromethanopterin reductase.
  
 
 0.538
AKB63801.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Belongs to the UPF0284 family.
    
  0.537
AKB66281.1
Nitroreductase family protein.
 
 
 0.527
AKB64849.1
Lactoylglutathione lyase and related lyase.
  
 
 0.526
AKB66463.1
Lactoylglutation lyase.
  
 
 0.526
AKB64614.1
Nitroreductase family protein.
 
 
 0.502
AKB63842.1
Nitroreductase family protein.
  
 
 0.447
AKB64572.1
Ferredoxin.
  
 
 0.447
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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