Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65021.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
AKB66376.1
Acetyltransferase (GNAT) family protein.
  
     0.662
AKB65678.1
Hypothetical protein.
  
     0.532
AKB65022.1
Endonuclease III.
       0.458
AKB65020.1
ABC transporter, permease protein.
       0.438
AKB65210.1
Phytoene dehydrogenase.
  
     0.433
AKB64239.1
Mobile element protein.
  
     0.414
AKB64617.1
Mobile element protein.
  
     0.409
AKB65019.1
Hypothetical protein.
       0.400
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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