STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65042.1Ferritin-like di-iron-carboxylate protein. (94 aa)    
Predicted Functional Partners:
AKB63631.1
Beta-ketoacyl synthase/thiolase.
  
 
 0.664
AKB63846.1
Putative electron-transfer protein.
   
 
 0.655
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.655
AKB65696.1
Rubrerythrin.
 
  
 0.556
AKB66076.1
Rubrerythrin.
 
  
 0.551
AKB64723.1
Aldo/keto reductase.
   
   0.547
AKB64993.1
Aldo/keto reductase.
   
   0.547
AKB64994.1
Aldo/keto reductase.
   
   0.547
AKB65928.1
Aldo/keto reductase.
   
   0.547
AKB65929.1
Aldo/keto reductase.
   
   0.547
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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