Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB65042.1Ferritin-like di-iron-carboxylate protein. (94 aa)    
Predicted Functional Partners:
AKB63869.1
Rubrerythrin.
 
   
 0.637
AKB63631.1
Beta-ketoacyl synthase/thiolase.
  
 
 0.557
AKB65696.1
Rubrerythrin.
 
  
 0.536
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
       0.533
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
       0.533
AKB66076.1
Rubrerythrin.
 
  
 0.532
AKB65041.1
L-sorbosone dehydrogenase.
       0.520
AKB63846.1
Putative electron-transfer protein.
   
 
 0.492
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.492
AKB63873.1
Superoxide reductase.
 
  
 0.467
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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