Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65053.1Transcriptional regulator, ArsR family. (339 aa)    
Predicted Functional Partners:
AKB65054.1
Hypothetical protein.
 
     0.826
mtd
F420-dependent methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
  
     0.613
AKB66027.1
DUF447 family protein.
 
     0.606
AKB63349.1
CAAX amino terminal protease family protein.
 
     0.568
AKB66444.1
Hypothetical protein.
  
     0.562
AKB63319.1
CAAX amino terminal protease family protein.
 
     0.550
AKB65762.1
Hypothetical protein.
  
     0.549
AKB65250.1
Hypothetical protein.
 
     0.543
AKB65134.1
OB-fold nucleic acid binding domain protein.
  
     0.542
AKB63204.1
RNA ligase, family.
 
     0.528
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.