STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65054.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
AKB63873.1
Superoxide reductase.
  
    0.907
AKB65053.1
Transcriptional regulator, ArsR family.
 
     0.826
AKB64892.1
Transcriptional regulator, ArsR family.
 
     0.671
AKB64586.1
Rubredoxin; Belongs to the rubredoxin family.
  
    0.639
AKB63687.1
Alkyl hydroperoxide reductase subunit C-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
    0.577
AKB64385.1
Carboxymuconolactone decarboxylase family protein.
 
    0.572
AKB63583.1
Alkylhydroperoxidase AhpD family core domain protein.
 
    0.523
AKB65055.1
Putative methanogenesis marker protein 8.
 
     0.501
AKB66444.1
Hypothetical protein.
  
     0.497
AKB63516.1
CoB--CoM heterodisulfide reductase subunit C.
  
    0.450
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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