STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65064.1ABC transporter, permease protein. (405 aa)    
Predicted Functional Partners:
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
  
  0.909
AKB64435.1
Lipoprotein releasing system transmembrane protein LolC.
 
  
 
0.908
AKB63550.1
ABC transporter, ATP-binding protein.
 
     0.518
AKB63547.1
ABC transporter, ATP-binding protein.
 
     0.504
AKB64784.1
ABC transporter, ATP-binding protein.
 
     0.495
AKB64856.1
ABC transporter, ATP-binding protein.
 
     0.485
AKB65018.1
Cell division transporter, ATP-binding protein FtsE; TCDB 3.A.5.1.1.
 
     0.478
AKB64793.1
Periplasmic component of the Tol biopolymer transport system-like protein precursor.
  
     0.457
AKB66257.1
ABC transporter, ATP-binding protein.
 
     0.448
AKB65234.1
ABC transporter, ATP-binding protein.
 
     0.415
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.