Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65080.1MoxR-related protein. (531 aa)    
Predicted Functional Partners:
AKB65079.1
Hypothetical protein.
 
     0.858
AKB66333.1
Hypothetical protein.
 
     0.766
AKB65201.1
Peptidase, M48 family.
 
    0.455
AKB64825.1
Hypothetical protein.
 
     0.451
AKB65231.1
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
 
  
 0.445
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.441
AKB65608.1
Pantoate kinase, archaeal.
   
    0.439
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.439
AKB64125.1
Hypothetical protein.
 
  
 0.438
AKB65878.1
CobN component of cobalt chelatase involved in B12 biosynthesis.
 
  
 0.432
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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