Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65083.1Mobile element protein. (102 aa)    
Predicted Functional Partners:
AKB65082.1
Mobile element protein.
 
     0.850
AKB66508.1
Mobile element protein.
  
     0.719
AKB66509.1
Mobile element protein.
  
     0.626
AKB65448.1
Mobile element protein.
  
     0.568
AKB65084.1
Mobile element protein.
       0.529
AKB65085.1
Mobile element protein.
       0.529
AKB64102.1
Mobile element protein.
  
     0.464
AKB66000.1
Mobile element protein.
  
     0.464
AKB66466.1
Mobile element protein.
  
     0.464
AKB64489.1
Mobile element protein.
  
     0.454
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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