STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (227 aa)    
Predicted Functional Partners:
AKB66233.1
ABC transporter, permease protein.
 0.957
AKB64782.1
Cell division protein FtsX.
 0.956
AKB64864.1
ABC transporter, permease protein.
 0.953
AKB63553.1
ABC transporter, permease protein.
 0.948
AKB63549.1
ABC transporter, permease protein.
 0.936
AKB65064.1
ABC transporter, permease protein.
 
  
  0.910
AKB65020.1
ABC transporter, permease protein.
 0.908
AKB64555.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
  
0.900
AKB64435.1
Lipoprotein releasing system transmembrane protein LolC.
 
  
  0.884
AKB66256.1
ABC transporter, permease protein.
 
 0.835
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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