STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65096.1Glycogen debranching enzyme. (631 aa)    
Predicted Functional Partners:
AKB64769.1
Glycogen phosphorylase.
  
 0.822
AKB64962.1
Mannose-6-phosphate isomerase, bifunctional enzyme.
 
 0.736
AKB64342.1
Malto-oligosyltrehalose trehalohydrolase.
 
 
 0.580
AKB65662.1
Glucoamylase.
 
  
 0.559
AKB63637.1
Glucoamylase.
 
  
 0.543
AKB65774.1
Glycosyltransferase.
 
 0.542
AKB63857.1
Glycosyltransferase.
 
 0.531
AKB63856.1
Glycosyl transferase, group 1.
 
 0.515
AKB63325.1
Glycosyl transferase, group 1.
  
 0.444
AKB63327.1
Glycosyltransferase.
  
 0.444
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.