STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65122.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
AKB64797.1
TPR domain protein, putative component of TonB system.
     0.667
AKB65121.1
Hypothetical protein.
    
0.549
AKB65123.1
Hypothetical protein.
       0.543
AKB63796.1
Hypothetical protein.
 
     0.538
AKB63998.1
Hypothetical protein.
  
     0.440
AKB65428.1
WD-domain containing protein.
  
     0.414
AKB64011.1
Phycocyanin alpha phycocyanobilin lyase.
  
     0.413
AKB63236.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.