STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65133.1Iron-sulfur flavoprotein. (189 aa)    
Predicted Functional Partners:
AKB64572.1
Ferredoxin.
 
 
 0.616
AKB64132.1
Ferredoxin.
 
    0.584
AKB63555.1
Iron-sulfur flavoprotein.
  
     0.560
AKB63399.1
PAC2 family protein.
  
    0.545
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
  
  
 0.494
AKB64614.1
Nitroreductase family protein.
 
 
 0.471
AKB66281.1
Nitroreductase family protein.
 
 
 0.468
AKB64884.1
Hypothetical protein.
 
 
 0.457
AKB65132.1
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.408
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.