STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65149.1Sensory transduction histidine kinase. (807 aa)    
Predicted Functional Partners:
AKB64870.1
Response regulator receiver.
 0.973
AKB63429.1
Two-component response regulator.
 
 0.891
AKB65033.1
Response regulator receiver.
 
 0.891
AKB65029.1
Sensory transduction histidine kinase.
 
 
0.889
AKB64678.1
Response regulator receiver.
 
 0.821
AKB66530.1
Two-component response regulator.
 
 
 0.794
AKB66534.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.739
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.632
AKB64172.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.618
AKB64167.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
 
 
 0.580
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.