STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65153.1Alcohol dehydrogenase. (386 aa)    
Predicted Functional Partners:
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.840
AKB65470.1
Dienelactone hydrolase family protein.
  
 
 0.816
AKB64477.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.787
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)]; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
 
 0.782
AKB64251.1
Serine--glyoxylate aminotransferase.
    
 0.762
AKB65323.1
Pyruvate formate lyase-activating enzyme 1.
  
 
 0.755
AKB65337.1
Molybdenum cofactor biosynthesis protein A.
  
 
 0.755
AKB66492.1
Ribonucleotide reductase of class III (anaerobic), activating protein.
  
 
 0.755
AKB64476.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.747
AKB63664.1
Aldehyde dehydrogenase.
 
 0.742
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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